Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015950913.1_cds_XP_016491154.1_81498
CDS Infomation

[gene=LOC107810839] [db_xref=GeneID:107810839] [protein=MACPF domain-containing protein At1g14780] [protein_id=XP_016491154.1] [location=complement(join(78654..79272,81648..81712,82118..82287,82653..82836,84014..84088,84500..84701,87907..88148,88232..88471))] [gbkey=CDS]
Sequence

ATGAACAATAATAGTATTGTAGAGAAGGCTATCAACAGCCTCGGAAAAGGCTTCGATTTG
ACCTGCGATTTTCGACTAAAGTATTGTAAAGGAGATGAAAGACTTGTGTTGCTCAATGAA
ACTGTCACAAAGGAGATCATGGTACCTGGTTTTGGAGCTTTTAATAATATCCCTGTTGAT
ATTAAATGTGATAAAGGCGATCGAGTTCGATTTCAGTCTGATATTCTTAGTTTTAATCAG
ATGTCTGAATTTATGAACAGAAAAAGTTCAGTGGCTGGGAAAATACCATCAGGATTGTTT
AATTCAATGTTTGGGTTTCAGAGTGGTTCATGGGCAACTGATGCAGCTAATACAAACTAC
TTAGGGCTTGATGGTTACTTCATTATATTGTTTGATGTTCATATTGATAGAAGTCCTCTT
CTTTTGGTTGATGAAGTTATAAATGCTGTTCCTTCCACTTGGGATCCTGCTGCTCTTGCA
AGGTTCATAGAGAAATATGGTACCCACATAATTGTGGGGTTGAGTATAGGAGGACAAGAT
GTGGTCCTAGTTAGGCAACACAAATTTTCCAACATGGAACCATCACAACTCAAGAACCAA
TTGGATGAACTTGGTGATCAGTTATTCACTGGCATTTGTAACTTCTCTCCTCACCAATGC
AAAACACGAGAACAAAAGCACAAGGCTCTGGAGGCGTTCAATGTTTTTGATCCACAACCC
AATATCTTCAGCGACTTCCCATCAGCTACCACAAAAGATGGAGTAACAGTGATATGTTCA
AAAAGAGGTGGAGATTTAACAGCAAACACACACAGTGAATGGCTTCTAACAGTAGCTTCA
AACCCAGATGCAATTGGCTTCAACTTCATTCCCATTACTTCCCTTCTCAAAGGTCTTCCT
GGCAAGGGTTTCTTATCACATGCTATCAACCTTTATCTTCGATACAAGCCACCTATAGCA
GATTTGCAGTATTTTCTGGATTTTCAAGCGCACAAGATGTGGGCCCCTATTCATAATGAT
CTTCCTTTAGGCCCAACTACAAATAGGTCCATTCGACCTCCAGCCCTTCATTTCAATTTG
ATGGGCCCCAAGCTTTACGTAAACCCAACTCAGGTAATTGTTGGAAAAACACCGGTAACT
GGTATGCGACTTTATCTTGAAGGGGTGAAGTGTGACAGGCTGGCCATACATCTTCAACAC
TTGCTAAACACTCCAGTACTCCTTCAAGACAAGATAGATGAACCACTAACATGGCGCGGA
TCCGAAGATGTACCCGACGATGATCGATACTTTGAAGCCATTCAATGGAAAAAATTCTCA
CACGTATGCACAGCCCCTGTAAAGTACGATCCTAAATGGATATCCTCAGGGGAAGACTTG
AGCTTCATTGTCACAGGAGCTCAACTCCACGTTAAAAAACACGAAACCAAGAGCATATTA
CACCTTAGACTTTTATATTCCAAGGTTTCCAACTCTTGCATTGTGCAATCTCAATGGATG
CAATGTGCCTTAGAAAGTTGTACAAAGTCAGGTAGTTTTTTGTCAGCTATTAGTACGCCC
GGTTTATCTGAGAAGGAGAAGACGCCGCTAGTGGTGGTGGATTCCGGCGTGTATCCGACT
GGGCCACCGGGGCCTTTGCAAACCCAAAAGCTACTGAAATTTGTGGATACAACACAGTTA
TGTAGAGGGCCATTGGATAGTCCAGGGCATTGGTTAGTCACTGGGGCTAAATTGGACTTG
GAAAGAGGGAAAATTTGCCTGCGTGTTAAATTCTCCTTGTTGAATATATCTTCTTAA

Peptide Sequence

PEP ID

XP_016491154.1
PEP Infomation

PREDICTED: MACPF domain-containing protein At1g14780 [Nicotiana tabacum]
Sequence

MNNNSIVEKAINSLGKGFDLTCDFRLKYCKGDERLVLLNETVTKEIMVPGFGAFNNIPVD
IKCDKGDRVRFQSDILSFNQMSEFMNRKSSVAGKIPSGLFNSMFGFQSGSWATDAANTNY
LGLDGYFIILFDVHIDRSPLLLVDEVINAVPSTWDPAALARFIEKYGTHIIVGLSIGGQD
VVLVRQHKFSNMEPSQLKNQLDELGDQLFTGICNFSPHQCKTREQKHKALEAFNVFDPQP
NIFSDFPSATTKDGVTVICSKRGGDLTANTHSEWLLTVASNPDAIGFNFIPITSLLKGLP
GKGFLSHAINLYLRYKPPIADLQYFLDFQAHKMWAPIHNDLPLGPTTNRSIRPPALHFNL
MGPKLYVNPTQVIVGKTPVTGMRLYLEGVKCDRLAIHLQHLLNTPVLLQDKIDEPLTWRG
SEDVPDDDRYFEAIQWKKFSHVCTAPVKYDPKWISSGEDLSFIVTGAQLHVKKHETKSIL
HLRLLYSKVSNSCIVQSQWMQCALESCTKSGSFLSAISTPGLSEKEKTPLVVVDSGVYPT
GPPGPLQTQKLLKFVDTTQLCRGPLDSPGHWLVTGAKLDLERGKICLRVKFSLLNISS

Transcript Sequence

Gene sequence data has not been registered.